Chapter 52 : Genetically Polymorphic Cytochrome P450s and Transporters and Personalized Antimicrobial Chemotherapy

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This chapter summarizes a number of functionally important genetic polymorphisms in drug-metabolizing enzymes and drug transporters and their genotyping methodologies, by which individuals susceptible to drug toxicity or loss of efficacy can be identified or predicted easily in the clinical setting. The human cytochrome P450 (CYP) enzyme system contributing to drug metabolism comprises the CYP families CYP1, CYP2, and CYP3. Among these CYPs, proteins encoded by the human CYP3A genes catalyze the metabolism of nearly half of all currently used drugs, and approximately 40% of all marketed drugs are substrates for CYP2C9, CYP2C19, and CYP2D6. Moreover, the CYP2B6, CYP2C9, CYP2C19, and CYP2D6 enzymes exhibit large variations in the levels of their protein expression and enzymatic activity as a result of frequently occurring, functionally important genetic polymorphisms. Typically, in addition to passive diffusion, a drug is transported into cells by uptake (or influx) transporters, such as organic anion transporters (OATs), organic anion transport peptides (OATPs), and organic cation transporters (OCTs), whereas the drug and its metabolite(s) are removed from the cells by efflux transporters, such as P-glycoprotein (P-gp), multidrug resistance proteins (MRPs), and breast cancer resistance protein (BCRP). Anti-infective drugs may be substrates for some uptake transporters, drug-metabolizing enzymes, and efflux transporters.

Citation: Xie H. 2011. Genetically Polymorphic Cytochrome P450s and Transporters and Personalized Antimicrobial Chemotherapy, p 803-832. In Persing D, Tenover F, Tang Y, Nolte F, Hayden R, van Belkum A (ed), Molecular Microbiology. ASM Press, Washington, DC. doi: 10.1128/9781555816834.ch52

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Restriction Fragment Length Polymorphism
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The four interrelationships between infectious pathogens, their hosts (i.e., patients), and anti-infective drugs.

Citation: Xie H. 2011. Genetically Polymorphic Cytochrome P450s and Transporters and Personalized Antimicrobial Chemotherapy, p 803-832. In Persing D, Tenover F, Tang Y, Nolte F, Hayden R, van Belkum A (ed), Molecular Microbiology. ASM Press, Washington, DC. doi: 10.1128/9781555816834.ch52
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Image of FIGURE 2

Genetic polymorphisms in the human gene and their localizations.

Citation: Xie H. 2011. Genetically Polymorphic Cytochrome P450s and Transporters and Personalized Antimicrobial Chemotherapy, p 803-832. In Persing D, Tenover F, Tang Y, Nolte F, Hayden R, van Belkum A (ed), Molecular Microbiology. ASM Press, Washington, DC. doi: 10.1128/9781555816834.ch52
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Polymorphisms in the human gene and their localizations. For more updated information, see http://www.cypalleles.ki.se/cyp2c19.htm.

Citation: Xie H. 2011. Genetically Polymorphic Cytochrome P450s and Transporters and Personalized Antimicrobial Chemotherapy, p 803-832. In Persing D, Tenover F, Tang Y, Nolte F, Hayden R, van Belkum A (ed), Molecular Microbiology. ASM Press, Washington, DC. doi: 10.1128/9781555816834.ch52
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Intracellular drug concentrations (available for drug action) are the result of interplay between drug transporters (uptake and efflux) and drug-metabolizing enzymes (DMEs) for a given drug. The main influx (or uptake) transporters include OATs, OATPs, and OCTs; efflux transporters include P-gp, MRPs, and BCRP; and DMEs include P450s and Phase II DMEs, such as uridine diphosphate glucuronyltransferase (UGT) and -acetyltransferase 2 (NAT2).

Citation: Xie H. 2011. Genetically Polymorphic Cytochrome P450s and Transporters and Personalized Antimicrobial Chemotherapy, p 803-832. In Persing D, Tenover F, Tang Y, Nolte F, Hayden R, van Belkum A (ed), Molecular Microbiology. ASM Press, Washington, DC. doi: 10.1128/9781555816834.ch52
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