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Chapter 33 : Evolution of Bordetella pertussis and Bordetella parapertussis as Deduced from Comparative Genome Analyses
Authors:
Andrew Preston1,
Duncan J. Maskell2
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Affiliations:
1: Department of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada;
2: Department of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom
Content Type: Monograph
Publication Year:
2008
Category: Fungi and Fungal Pathogenesis; Bacterial Pathogenesis
Book DOI:
10.1128/9781555815639
Chapter DOI:
10.1128/9781555815639.ch33
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Evolution of Bordetella pertussis and Bordetella parapertussis as Deduced from Comparative Genome Analyses, Page 1 of 2
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Abstract:
The genus Bordetella contains three widely studied species: Bordetella pertussis, B. parapertussis, and B. bronchiseptica. These gram-negative coccobacilli cause respiratory disease in humans and other mammals. The significance of insertion sequence (IS) elements to the evolution of B. pertussis and B. parapertussis is discussed. The bordetellae provide an opportunity to propose hypotheses to answer questions about speciation, host restriction, and differences in genotype that could account for virulence phenotypes. This was the rationale behind the Bordetella genome sequence project in which the genome sequences of representative strains of B. bronchiseptica, B. pertussis, and B. parapertussis were generated and analyzed. The evolution of any bacterium is shaped by the selection pressures faced by the organism. The evolution of species toward causing highly contagious infections, but with a low infectivity period, from a progenitor that is much less contagious but with a very prolonged infectious period is a recurrent theme in the evolution of human pathogens. A number of putative mutations are predicted to increase the level of expression of the pertussis toxin (PT) genes in B. pertussis compared to B. bronchiseptica or B. parapertussis, and this might have contributed to the change from chronic to acute infections during B. pertussis evolution. Analysis of B. parapertussis reveals that it appears to have evolved in the face of selection pressure against the expression of factors that might be recognized by existing host immunity, but in this case directed against B. pertussis.
Citation:
Preston A, Maskell D.
2008.
Evolution of Bordetella pertussis and Bordetella parapertussis as Deduced from Comparative Genome Analyses,
p 397-405.
In
Baquero F, Nombela C, Cassell G, Gutiérrez-Fuentes J (ed),
Evolutionary Biology of Bacterial and Fungal Pathogens.
ASM Press, Washington, DC.
doi: 10.1128/9781555815639.ch33
Figures
Evolution of Bordetella pertussis and Bordetella parapertussis as Deduced from Comparative Genome Analyses
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Citation:
Preston A, Maskell D.
2008.
Evolution of Bordetella pertussis and Bordetella parapertussis as Deduced from Comparative Genome Analyses,
p 397-405.
In
Baquero F, Nombela C, Cassell G, Gutiérrez-Fuentes J (ed),
Evolutionary Biology of Bacterial and Fungal Pathogens.
ASM Press, Washington, DC.
doi: 10.1128/9781555815639.ch33
/content/10.1128/9781555815639.ch33.ch33fig01
Figure 1.
Linear genomic comparison of B. pertussis, B. bronchiseptica, and B. parapertussis. The gray bars represent the forward and reverse strands. (Top) B. pertussis. Black triangles represent IS elements. (Center) B. bronchiseptica. Boxes represent prophage. (Bottom) B. parapertussis. Black triangles represent IS elements. The lines between the genomes represent DNA:DNA similarities (BLASTN matches) between the two sequences. Reprinted by permission from MacMillan Publishers Ltd., Nature Genetics (Parkhill et al., 2003). © 2003.
10.1128/9781555815639/f0399-01_thmb.gif
10.1128/9781555815639/f0399-01.gif
Figure 1.
Linear genomic comparison of B. pertussis, B. bronchiseptica, and B. parapertussis. The gray bars represent the forward and reverse strands. (Top) B. pertussis. Black triangles represent IS elements. (Center) B. bronchiseptica. Boxes represent prophage. (Bottom) B. parapertussis. Black triangles represent IS elements. The lines between the genomes represent DNA:DNA similarities (BLASTN matches) between the two sequences. Reprinted by permission from MacMillan Publishers Ltd., Nature Genetics (Parkhill et al., 2003). © 2003.
Citation:
Preston A, Maskell D.
2008.
Evolution of Bordetella pertussis and Bordetella parapertussis as Deduced from Comparative Genome Analyses,
p 397-405.
In
Baquero F, Nombela C, Cassell G, Gutiérrez-Fuentes J (ed),
Evolutionary Biology of Bacterial and Fungal Pathogens.
ASM Press, Washington, DC.
doi: 10.1128/9781555815639.ch33
References
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Tables
Evolution of Bordetella pertussis and Bordetella parapertussis as Deduced from Comparative Genome Analyses
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Citation:
Preston A, Maskell D.
2008.
Evolution of Bordetella pertussis and Bordetella parapertussis as Deduced from Comparative Genome Analyses,
p 397-405.
In
Baquero F, Nombela C, Cassell G, Gutiérrez-Fuentes J (ed),
Evolutionary Biology of Bacterial and Fungal Pathogens.
ASM Press, Washington, DC.
doi: 10.1128/9781555815639.ch33
/content/10.1128/9781555815639.ch33.ch33tab01
Table 1.
General features of the genomes of B. pertussis, B. parapertussis, and B. bronchisepticaa
Table 1.
General features of the genomes of B. pertussis, B. parapertussis, and B. bronchisepticaa
Citation:
Preston A, Maskell D.
2008.
Evolution of Bordetella pertussis and Bordetella parapertussis as Deduced from Comparative Genome Analyses,
p 397-405.
In
Baquero F, Nombela C, Cassell G, Gutiérrez-Fuentes J (ed),
Evolutionary Biology of Bacterial and Fungal Pathogens.
ASM Press, Washington, DC.
doi: 10.1128/9781555815639.ch33
/content/10.1128/9781555815639.ch33.ch33tab02
Table 2.
Select examples of Bordetella loci that are present in all three genome sequences but appear to be functional in only one or two species
Table 2.
Select examples of Bordetella loci that are present in all three genome sequences but appear to be functional in only one or two species
Citation:
Preston A, Maskell D.
2008.
Evolution of Bordetella pertussis and Bordetella parapertussis as Deduced from Comparative Genome Analyses,
p 397-405.
In
Baquero F, Nombela C, Cassell G, Gutiérrez-Fuentes J (ed),
Evolutionary Biology of Bacterial and Fungal Pathogens.
ASM Press, Washington, DC.
doi: 10.1128/9781555815639.ch33