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1. Baehr, W.,, Y. X. Zhang,, T. Joseph,, H. Su,, F. E. Nano,, K. D. Everett,, and H. D. Caldwell. 1988. Mapping antigenic domains expressed by Chlamydia trachomatis major outer membrane protein genes. Proc. Natl Acad. Sci. USA 85: 4000 4004.
2. Barry, C. E., III,, T. J. Brickman,, and T. Hackstadt. 1993. Hcl-mediated effects on DNA structure: a potential regulator of chlamydial development. Mol. Microbiol. 9: 273 283.
3. Barry, C.E., III.,, S. F. Hayes,, and T. Hackstadt 1992. Nucleoid condensation in Escherichia coli that express a chlamydial histone homolog. Science 256: 377 379.
4. Bavoil, P.,, R. S. Stephens,, and S. Falkow. 1990. A soluble 60 kiloDalton antigen of Chlamydia spp. is a homologue of Escherichia coli GroEL. Mol. Microbiol. 4: 461 469.
5. Beatty, P. R.,, and R. S. Stephens. 1994. CD8 + T lymphocyte-mediated lysis of Chlamydia-infected L cells using an endogenous antigen pathway. J. Immunol. 153: 4588 4595.
6. Brunham, R. C.,, R. Peeling,, I. Maclean,, J. McDowell,, K. Persson,, and S. Osser. 1987. Postabortal Chlamydia trachomatis salpingitis: correlating risk with antigen-specific serological responses and with neutralization. J. Infect. Dis. 155: 749 755.
7. Brunham, R. C.,, F. A. Plummer,, and R. S. Stephens. 1993. Bacterial antigenic variation, host immune response, and pathogen-host coevolution. Infect. Immun. 61: 2273 2276.
8. Burillo, C. A.,, J. D. Fontenot,, and D. M. Phillips. 1998. Sulfated polysaccharides block Chlamydia infection in vitro, but do not protect mice from vaginal inoculation. Microb. Pathog. 24: 253 256.
9. Byrne, G. I.,, R. S. Stephens,, G. Ada,, H. D. Caldwell,, H. Su,, R. P. Morrison,, B. VanderPol,, P. Bavoil,, L. Bobo,, S. Everson,, Y. Ho,, R. C. Hsia,, K. Kennedy,, C. C. Kuo,, P. C. Montgomery,, E. Peterson,, A. Swanson,, C. Whitaker,, J. Whittum-Hudson,, and C. L. Yang. 1993. Workshop on in vitro neutralization of Chlamydia trachomatis: summary of proceedings. J. Infect. Dis. 168: 415 420.
10. Cain, T. K.,, and R. G. Rank. 1995. Local T H1-like responses are induced by intravaginal infection of mice with the mouse pneumonitis biovar of Chlamydia trachomatis. Infect. Immun. 63: 1784 1789.
11. Cerrone, M. C.,, J. J. Ma,, and R. S. Stephens. 1991. Cloning and sequence of the gene for heat shock protein 60 from Chlamydia trachomatis and immunological reactivity of the protein. Infect. Immun. 59: 79 90.
12. Chen, J. C.,, and R. S. Stephens. 1994. Trachoma and LGV biovars of Chlamydia trachomatis share the same glycosaminoglycan-dependent mechanism for infection of eukaryotic cells. Mol. Microbiol. 11: 501 507.
13. Chen, J. C.,, J. P. Zhang,, and R. S. Stephens. 1996. Structural requirements of heparin binding to Chlamydia trachomatis. J. Biol. Chem. 271: 11134 11140.
14. Costerton, J. W.,, L. Poffenroth,, J. C. Wilt,, and N. Kordova. 1976. Ultrastructural studies of the nucleoids of the pleomorphic forms of Chlamydia psittaci 6BC: a comparison with bacteria. Can. J. Bacteriol. 22: 16 26.
15. Dean, D.,, J. Schachter,, C. R. Dawson,, and R. S. Stephens. 1992. Comparison of the major outer membrane protein variant sequence regions of B/Ba isolates: a molecular epidemiologic approach to Chlamydia trachomatis infections. J. Infect Dis. 166: 383 392.
16. Engel, J. N.,, and D. Ganem. 1990. A polymerase chain reaction-based approach to cloning sigma factors from eubacteria and its application to the isolation of a sigma-70 homolog from Chlamydia trachomatis. J. Bacteriol. 172: 2447 2455.
17. Everett, K. D.,, and A. A. Andersen. 1997. The ribosomal intergenic spacer and domain I of the 23S rRNA gene are phylogenetic markers for Chlamydia spp. Int. J. Syst. Bacteriol. 47: 461 473.
18. Fan, J.,, and R. S. Stephens. 1997. Antigen conformation dependence of Chlamydia trachomatis infectivity neutralization. J. Infect. Dis. 176: 713 721.
19. Fan, T.,, H. Lu,, H. Hu,, L. Shi,, G. A. McCIarty,, D. M. Nance,, A. H. Greenberg,, and G. Zhong. 1998. Inhibition of apoptosis in chlamydia-infected cells: blockade of mitochondrial cytochrome c release and caspase activation. J. Exp. Med. 187: 487 496.
20. Fukushi, H., and K. Hirai. 1992. Proposal of Chlamydia pecorum sp. nov. for Chlamydia strains derived from ruminants. Int. J. Syst. Bacteriol. 42: 306 308.
21. Grayston, J. T.,, C.-C. Kuo,, L. A. Campbell,, and S.-P. Wang. 1989. Chlamydia pneumoniae sp. nov. for Chlamydia strain TWAR. Int. J. Syst. Bacteriol. 39: 88 90.
22. Hackstadt, T. 1991. Purification and N-terminal amino acid sequences of Chlamydia trachomatis histone analogs. J. Bacteriol. 173: 7046 7049.
23. Hackstadt, T.,, W. Baehr,, and Y. Ying. 1991. Chlamydia trachomatis developmental^ regulated protein is homologous to eukaryotic histone HI. Proc. Natl. Acad. Sci. USA 88: 3937 3941.
24. Hackstadt, T.,, E. R. Fischer,, M. A. Scidmore,, D. D. Rockey,, and R. A. Heinzen. 1997. Origins and functions of the chlamydial inclusion. Trends Microbiol. 5: 288 293.
25. Hatch, G. M.,, and G. McCIarty. 1998. Cardiolipin remodeling in eukaryotic cells infected with Chlamydia trachomatis is linked to elevated mitochondrial metabolism. Biochem. Biophys. Res. Commun. 243: 356 360.
26. Heinzen, R. A.,, M. A. Scidmore,, D. D. Rockey,, and T. Hackstadt. 1996. Differential interaction with endocytic and exocytic pathways distinguish parasitophorous vacuoles of Coxiella burnetii and Chlamydia trachomatis. Infect. Immun. 64: 796 809.
27. Holland, M. J.,, R. L. Bailey,, D. J. Conway,, F. Culley,, G. Miranpuri,, G. I. Byrne,, H. C. Whittle,, and D. C. Mabey. 1996. T helper type-1 (Thl)/Th2 profiles of peripheral blood mononuclear cells (PBMC); responses to antigens of Chlamydia trachomatis in subjects with severe trachomatous scarring. Clin. Exp. Immunol. 105: 429 435.
28. Igietseme, J. U.,, D. M. Magee,, D. M. Williams,, and R. G. Rank. 1994. Role for CD8 + T cells in antichlamydial immunity defined by Chlamydia-sptcific T-lymphocyte clones. Infect. Immun. 62: 5195 5197.
29. Jones, H. M.,, J. Schachter,, and R. S. Stephens. 1992. Evaluation of the humoral immune response in trachoma to Chlamydia trachomatis major outer membrane proteins by sequence-defined immunoassay. J. Infect. Dis. 166: 915 919.
30. Kaul, R.,, A. Hoang,, P. Yau,, E. M. Bradbury,, and W. M. Wenman. 1997. The chlamydial EUO gene encodes a histone HI-specific protease. J. Bacteriol. 179: 5928 5934.
31. Kihlstrom, E.,, M. Majeed,, B. Rozalska,, and T. Wadstrom. 1992. Binding of Chlamydia trachomatis serovar L2 to collagen types I and IV, fibronectin, heparan sulphate, laminin and vitronectin. Int. J. Med. Microbiol. Virol. Parasitol. Infect. Dis. 277: 329 333.
32. Koehler, J. E.,, R. R. Burgess,, N. E. Thompson,, and R. S. Stephens. 1990. Chlamydia trachomatis RNA polymerase major σ subunit. Sequence and structural comparison of conserved and unique regions with Escherichia coli σ70 and Bacillus subtilis σ43. J. Biol. Chem. 265: 13206 13214.
33. Magee, D. M.,, D. M. Williams,, J. G. Smith,, C. A. Bleicker,, B. G. Grubbs,, J. Schachter,, and R. G. Rank. 1995. Role of CD8 T cells in primary Chlamydia infection. Infect. Immun. 63: 516 521.
34. Majeed, M.,, J. D. Ernst,, K.-E. Magnusson,, E. Kihlstrom,, and O. Stendahl. 1994. Selective translocation of annexins during intracellular redistribution of Chlamydia trachomatis in HeLa and McCoy cells. Infect. Immun. 62: 126 134.
35. Majeed, M.,, M. Gustafsson,, E. Kihlstrom,, and O. Stendahl. 1993. Roles of Ca 2+ and F-actin in intracellular aggregation of Chlamydia trachomatis in eucaryotic cells. Infect. Immun. 61: 1406 1414.
36. Mathews, S. A,, and K. S. Sriprakash. 1994. The RNA polymerase of Chlamydia trachomatis has a flexible sequence requirement at the -10 and -35 boxes of its promoters. J. Bacteriol. 176: 3785 3789.
37. Mathews, S. A,, and R. S. Stephens. DNA structure and novel amino and carboxyl termini of the Chlamydia σ 70 analog modulate promoter recognition. Microbiology, in press.
38. Mosmann, T. R.,, and R. L. Coffman. 1989. T H, and T H2 cells: different patterns of lymphokine secretion lead to different functional properties. Annu. Rev. Immunol. 7: 145 149.
39. Moulder, J. W. 1991. Interaction of chlamydiae and host cells in vitro. Microbiol. Rev. 55: 143 190.
40. Moulder, J. W.,, J. P. Hatch,, C. C. Kuo,, J. Schachter,, and J. Storz,. 1984. Genus I. Chlamydia Jones, Rake and Stearns 1945, 55 AL, p. 729 739. In N. R. Krieg, and J. G. Holt (éd.), Bergey's Manual of Systematic Bacteriology, vol. 1. Williams and Wilkins, Baltimore, Md.
41. Ojcius, D. M.,, H. Degani,, J. Mispelter,, and A. Dautry-Varsat. 1998. Enhancement of ATP levels and glucose metabolism during an infection by Chlamydia. NMR studies of living cells. J. Biol. Chem. 273: 7052 7058.
42. Pal, S.,, I. Theodor,, E. M. Peterson,, and L. M. de la Maza. 1997. Immunization with an acellular vaccine consisting of the outer membrane complex of Chlamydia trachomatis induces protection against a genital challenge. Infect. Immun. 65: 3361 3369.
43. Pedersen, L. B.,, S. Birkelund,, and G. Christiansen. 1994. Interaction of the Chlamydia trachomatis histone HI-like protein (Hcl) with DNA and RNA causes repression of transcription and translation in vitro. Mol. Microbiol. 11: 1085 1098.
44. Pennisi, E. 1998. Genome data shake tree of life. Science 280: 672 674.
45. Perara, E.,, D. Ganem,, and J. N. Engel. 1992. A developmental^ regulated chlamydial gene with apparent homology to eukaryotic histone HI. Proc. Natl. Acad. Sci. USA 89: 2125 2129.
46. Perry, L. L.,, K. Feilzer,, and H. D. Caldwell. 1997. Immunity to Chlamydia trachomatis is mediated by T helper 1 cells through IFN-gamma-dependent and -independent pathways. J. Immunol. 158: 3344 3352.
47. Pudjiatmoko,, H. Fukushi,, Y. Ochiai,, T. Yamaguchi,, and K. Hirai. 1997. Phylogenetic analysis of the genus Chlamydia based on 16S rRNA gene sequences. Int. J. Syst. Bacteriol. 47: 425 431.
48. Ramsey, K. H.,, and R. G. Rank. 1991. Resolution of chlamydial genital infection with antigen-specific T-lymphocyte lines. Infect. Immun. 59: 925 931.
49. Rasmussen, S. J. 1998. Chlamydia immunology. Curr. Opin. Infect. Dis. 11: 37 41.
50. Rasmussen, S. J.,, L. Eckmann,, A. J. Quayle,, L. Shen,, Y. X. Zhang,, D. J. Anderson,, J. Fierer,, R. S. Stephens,, and M. F. Kagnoff. 1997. Secretion of proinflammatory cytokines by epithelial cells in response to Chlamydia infection suggests a central role for epithelial cells in chlamydial pathogenesis. J. Clin. Invest. 99: 77 87.
51. Rasmussen, S. J.,, C. K. Sen,, and R. S. Stephens,. 1998. Temporal expression of interleukin-8 in Chlamydia-infected epithelial cells, p. 411 414. In R. S. Stephens,, G. I. Byrne,, G. Christiansen,, I. N. Clarke,, J. T. Grayston,, R. G. Rank,, G. L. Ridgway,, P. Saikku,, J. Schachter,, and W. E. Stamm (ed.), Chlamydial Infections. Proceedings of the Ninth International Symposium on Human Chlamydial Infection. International Chlamydia Symposium, San Francisco, Calif.
52. Rockey, D. D.,, D. Grosenbach,, D. E. Hruby,, M. G. Peacock,, R. A. Heinzen,, and T. Hackstadt. 1997. Chlamydia psittaci IncA is phosphorylated by the host cell and is exposed on the cytoplasmic face of the developing inclusion. Mol. Microbiol. 24: 217 228.
53. Rockey, D. D.,, R. A. Heinzen,, and T. Hackstadt. 1995. Cloning and characterization of a Chlamydia psittaci gene coding for a protein localized in the inclusion membrane of infected cells. Mol. Microbiol. 15: 617 626.
54. Rockey, D. D.,, and J. L. Rosquist. 1994. Protein antigens of Chlamydia psittaci present in infected cells but not detected in the infectious elementary body. Infect. Immun. 62: 106 112.
55. Schachter, J.,, J. Moneada,, R. Whidden,, H. Shaw,, G. Bolan,, and J. D. Burczak. 1995. Noninvasive tests for diagnosis of Chlamydia trachomatis infection; application of ligase chain reaction to first-catch urine specimens of women. J. Infect. Dis. 172: 1411 1414.
56. Schramm, N.,, C. R. Bagnell,, and P. B. Wyrick. 1996. Vesicles containing Chlamydia trachomatis serovar L2 remain above pH 6 within HEC-1B cells. Infect. Immun. 64: 1208 1214.
57. Scidmore, M. A.,, D. D. Rockey,, E. R. Fischer,, R. A. Heinzen,, and T. Hackstadt 1996. Vesicular interactions of the Chlamydia trachomatis inclusion are determined by chlamydial early protein synthesis rather than route of entry. Infect. Immun. 64: 5366 5372.
58. Starnbach, M. N.,, M. J. Bevan,, and M. F. Lampe. 1994. Protective cytotoxic T lymphocytes are induced during murine infection with Chlamydia trachomatis. J. Immunol. 153: 5183 5189.
59. Stephens, R. S., 1988. Chlamydial genetics, p. 111 134. In A. L. Barron (éd.), Microbiology of Chlamydia. CRC Press, Boca Raton, Fia.
60. Stephens, R. S., 1989. Antigenic variation of Chlamydia trachomatis, p. 51 62. In J. W. Moulder (ed.), Intracellular Parasitism. CRC Press, Boca Raton, Fla.
61. Stephens, R. S. 1992. Challenge of Chlamydia research. Infect. Agents Dis. 1: 279 293.
62. Stephens, R. S. 1994. Molecular mimicry and Chlamydia trachomatis infection of eukaryotic cells. Trends Microbiol. 2: 99 101.
63. Stephens, R. S. 1998. Unpublished observation.
64. Stephens, R. S.,, S. Kalman,, C. J. Lammel,, J. Fan,, R. Marathe,, L. Aravind,, W. P. Mitchell,, L. Olinger,, R. L. Tatusov,, Q. Zhao,, E. V. Koonin,, and R. W. Davis. 1998. Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis. Science 282: 754 759.
65. Stephens, R. S.,, M. R. Tarn,, C. C. Kuo,, and R. C. Nowinski. 1982. Monoclonal antibodies to Chlamydia trachomatis: antibody specificities and antigen characterization. J. Immunol. 128: 1083 1089.
66. Stephens, R. S.,, E. A. Wagar,, and G. K. Schoolnik. 1988. High-resolution mapping of serovar-specific and common antigenic determinants of the major outer membrane protein of Chlamydia trachomatis. J. Exp. Med. 167: 817 831.
67. Su, H.,, and H. D. Caldwell. 1991. In vitro neutralization of Chlamydia trachomatis by monovalent Fab antibody specific to the major outer membrane protein. Infect. Immun. 59: 2843 2845.
68. Su, H.,, and H. D. Caldwell. 1998. Sulfated polysaccharides and a synthetic sulfated polymer are potent inhibitors of Chlamydia trachomatis infectivity in vitro but lack protective efficacy in an in vivo murine model of chlamydial genital tract infection. Infect. Immun. 66: 1258 1260.
69. Su, H.,, R. Messer,, W. Whitmire,, E. Fischer,, J. C.. Portis, and H. D. Caldwell. 1998. Vaccination against chlamydial genital tract infection after immunization with dendritic cells pulsed ex vivo with nonviable chlamydiae. J. Exp. Med. 188: 809 818.
70. Su, H.,, L. Raymond,, D. D. Rockey,, E. Fischer,, T. Hackstadt,, and H. D. Caldwell. 1996. A recombinant Chlamydia trachomatis major outer membrane protein binds to heparan sulfate receptors on epithelial cells. Proc. Natl. Acad. Sci. USA 93: 11143 11148.
71. Su, H.,, G. J. Spangrude,, and H. D. Caldwell. 1991. Expression of Fc-yRIII on HeLa 229 cells: possible effect on in vitro neutralization of Chlamydia trachomatis. Infect. Immun. 59: 3811 3814.
72. van Ooij, C.,, G. Apodaca,, and J. Engel. 1997. Characterization of the Chlamydia trachomatis vacuole and its interaction with the host endocytic pathway in HeLa cells. Infect. Immun. 65: 758 766.
73. Van Voorhis, W. C.,, L. K. Barrett,, Y. T. Sweeney,, C. C. Kuo,, and D. L. Patton. 1997. Repeated Chlamydia trachomatis infection of Macaca nemestrina fallopian tubes produces a Thl-like cytokine response associated with fibrosis and scarring. Infect. Immun. 65: 2175 2182.
74. Wagar, E. A.,, J. Schachter,, P. Bavoil,, and R. S. Stephens. 1990. Differential human serologic response to two 60,000 molecular weight Chlamydia trachomatis antigens. J. Infect. Dis. 162: 922 927.
75. Wagar, E. A.,, and R. S. Stephens. 1988. Developmental-form-specific DNA-binding proteins in Chlamydia spp. Infect. Immun. 56: 1678 1684.
76. Weisburg, W. G.,, T. P. Hatch,, and C. R. Woese. 1986. Eubacterial origin of chlamydiae. J. Bacteriol. 167: 570 574.
77. Wyrick, P. B., 1998. Cell biology of chlamydial infection, p. 69 78. In R. S. Stephens,, G. I. Byrne,, G. Christiansen,, I. N. Clarke,, J. T. Grayston,, R. G. Rank,, G. L. Ridgway,, P. Saikku,, J. Schachter,, and W. E. Stamm (ed.), Chlamydial Infections. Proceedings of the Ninth International Symposium on Human Chlamydial Infection. International Chlamydia Symposium, San Francisco, Calif.
78. Yang, X.,, K. T. HayGlass,, and R. C. Brunham. 1996. Genetically determined differences in IL-10 and IFN-gamma responses correlate with clearance of Chlamydia trachomatis mouse pneumonitis infection. J. Immunol. 156: 4338 4344.
79. Zhang, D.,, X. Yang,, J. Berry,, C. Shen,, G. McClarty,, and R. C. Brunham. 1997. DNA vaccination with the major outer-membrane protein gene induces acquired immunity to Chlamydia trachomatis (mouse pneumonitis) infection. J. Infect. Dis. 176: 1035 1040.
80. Zhang, J. P.,, and R. S. Stephens. 1992. Mechanism of C. trachomatis attachment to eukaryotic host cells. Cell 69: 861 869.
81. Zhong, G.,, G. P. Smith,, J. Berry,, and R. C. Brunham. 1994. Conformational mimicry of a chlamydial neutralization epitope on filamentous phage. J. Biol. Chem. 269: 24183 24188.

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